Publications

• Muller’s ratchet with compensatory mutations. Peter Pfaffelhuber, Paul R Staab and Anton Wakolbinger. Accepted. Preprint on arxiv.org.
• Muller’s ratchet with compensatory mutations. Paul R Staab. Diploma thesis. pdf.
• SynBioWave – a real-time communication platform for molecular and synthetic biology. Paul R Staab; Jorg Walossek; David Nellessen; Raik Grunberg; Katja M. Arndt; Kristian M. Müller. Bioinformatics 2010; doi:10.1093/bioinformatics/btq518. Abstract – pdf.

Software

• Jaatha
  
• mrj – Muller’s ratchet in Java. Simulates a population of haploids undergoing Muller’s ratchet. Capable of compensatory mutations. Runnable jar file – Source code.
• SynBioWave. A collaborative synthetic biological software suite, based on discontinued Google Wave.